SW4404 : Advanced Soil Microbiology

Department

Department of Soil and Water

Academic Program

Master in Soil Science

Type

Compulsory

Credits

04

Prerequisite

Overview

This course deals with the study of harmful and beneficial soil microorganisms and how to control them. It discusses the role played by soil microbes in decomposing dead organic matter, enriching the soil with nutrients, and regulating water movement in the soil, and improve soil texture. It also expands the student's perceptions of employing host organisms and the interactions that occur with them in increasing production and resisting pests such as fungal symbiosis and biological fixation of atmospheric nitrogen, both symbiotic and non-symbiotic. The course also covers the study of the most important modern molecular techniques used in the detection of soil microbes.

Intended learning outcomes

By the end of the course the student will be able to:

A. Knowledge & understand

A.1.

Write about the multiple beneficial effects of soil microorganisms on soil health, and in food and fiber production.

A.2.

Identify soil microbes important in the decomposition of organic matter into the soil

A.3.

Recognize that the soil is a suitable home for many microorganisms that work to balance the ecosystem in the soil

A.4.

Find the relationship between soil microbes, their enzymes, and the processes they carry out in the soil environment

A.5.

List DNA-based and community-based microbial fingerprinting methods for soil microbiology

B. Mental skills

B.1.

Explain the multiple beneficial effects of soil microorganisms on soil health, and this is beneficial in food and fiber production.

B.2.

Discover that the soil is an excellent habitat for many microorganisms that work to balance the ecosystem in the soil

B.3.

Deduce the environmental importance of some soil microbes, what they feed on, and what they may add of organic matter to the soil.

B.4.

Apply molecular methods in the study of soil microbial biodiversity

B.5.

Apply the correct methods in collecting soil samples from the surface and subsurface soil for the purposes of microbiological tests.

C. Practical & professional skills

C.1.

Use the basic equipment of the microbiology laboratory and the soil analysis laboratory, such as light microscopes, sterilizers, centrifuges, and others

C.2.

Prepare specific food media for the growth of specific microbes

C.3.

Apply methods of isolating, storing and growing microbes from the soil.

C.4.

Employ the important types of soil microbes in the processes of restoring and healing the soil and increasing agricultural production

C.5.

Explain the most important molecular methods used to detect the microbial community and its changes in soil.

D. Generic and transferable skills

D.1.

possess the ability to use the computer to search for information related to the course

D.2.

Possess the ability to make presentations

D.3.

Able to work as a team and respects the opinions of others

D.4.

Write reports and working papers on the course vocabulary

D.5.

Use critical thinking and problem-solving skills when dealing with information, concepts and theories related to the course

Teaching and learning methods

1. Lectures

2. Laboratory activities

3. Data collection

4. Case Study

Methods of assessments

N

Evaluation methods

Percentage

1

First midterm exam )After the fifth week of study(

25%

2

Second midterm exam ) After the tenth week of study(

15%

3

Practical exam (After the twelfth week of study)

10%

4

Final exam (After the twelfth week of study)

50%

Total

100%